Antigen

Antigen Class

TFs and others

Antigen

Rara

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

source_name

Liver

strain

C57BL/6

tissue

liver

gender

male

age

3 Month

antibody

RARα antibody

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Grand in liquid nitrogen, then fixed, sonication, pull down by RARα antibody from Santa Cruz (sc-551x). Illumina True-Seq Kit

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

36771963

Reads aligned (%)

87.9

Duplicates removed (%)

67.8

Number of peaks

18155 (qval < 1E-05)

mm9

Number of total reads

36771963

Reads aligned (%)

87.8

Duplicates removed (%)

68.0

Number of peaks

18181 (qval < 1E-05)